SeqAn :: T-Coffee
SeqAn::T-Coffee is an open source multiple sequence alignment program. SeqAn::T-Coffee aligns amino acid, DNA and RNA sequences using a consistency-based progressive alignment algorithm on a graph of sequence segments.
Rausch, T., Emde, A.-K., Weese, D., Doring, A., Notredame, C., and Reinert, K. (2008). Segment-based multiple sequence alignment. Bioinformatics, 24(16), i187–192.
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