Third-Party

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Mitotool

 

If you are not redirected automatically, go to http://www.mitotool.org/.

Popins

 

If you are not redirected automatically, go to https://github.com/bkehr/popins.

Flexbar

 

If you are not redirected automatically, go to https://github.com/seqan/flexbar.

Mugsy

 

If you are not redirected automatically, go to http://mugsy.sourceforge.net/.

DELLY

 

If you are not redirected automatically, go to http://www.korbel.embl.de/software.html.

Tophat

If you are not redirected automatically, go to http://ccb.jhu.edu/software/tophat/index.shtml.

Bowtie

If you are not redirected automatically, go to http://bowtie-bio.sourceforge.net/index.shtml.